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Creators/Authors contains: "Clay, Keith"

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  1. Restoration of coastal dunes following tropical storm events often requires renourishment of sand substrate dredged from offshore sources, although dredging has well‐described negative ecological impacts and high economic costs. As a potential solution, recycled glass sand (cullet) made from crushed glass bottles has been proposed as a potential replacement for dredging. However, glass sand substrates may have limited ability to provide support to coastal plant communities due to the absence of native soil microbial communities. To explore the potential use of glass sand as a substrate for dune plants in the Northern Gulf of Mexico, we compared the growth of Sea oats (Uniola paniculata), Beach morning‐glory (Ipomoea imperati), and Railroad vine (I. pes‐caprae) in glass sand to growth in live beach sand. To determine if inoculation of glass sand with native soil microbial communities improved survival, growth, and biomass production, we also tested plant growth in glass sand with native microbial amendments. Overall, we found no difference in the survival of the three dune species across three soil treatments and weak differences in plant growth and biomass production across our soil substrates. Our results suggest that glass sand substrates may be a viable option for coastal dune restoration, with limited differences between live beach sand, glass sand, and glass sand inoculated with native soil microbes. Restoration and replenishment of coastal dunes using glass sand as a substrate following tropical storms or sea‐level rise may allow coastal managers to reduce the economic and ecological damage associated with offshore sediment dredging. 
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    Free, publicly-accessible full text available April 29, 2026
  2. Abstract Seedling recruitment is an important mode of establishment utilized by many invasive plants. In widespread invasive plants, regional variation in the rates of seedling recruitment can contribute to differences in invasion intensity across regions. In this study, we examined regional variation in reproductive traits and seedling performance in a cosmopolitan invasive wetland grass,Phragmites australis. We tested whether nitrogen levels and regions with different histories and intensities of invasion would affect reproductive traits and seedling performance. We sampled invasivePhragmitesinflorescences from 34 populations across three regions in North America: The Northeast (old, most intense invasion), the Midwest (recent, intense invasion), and Southeast (recent, sparse invasion). We hypothesized that NortheastPhragmitespopulations would have the highest reproductive output and seedling performance, and that populations experiencing high nitrogen pollution would have higher reproductive output and seedling performance under high nitrogen conditions. We found that populations in the Northeast had the highest inflorescence mass, as expected. We also found that despite sparse distribution ofPhragmitesin the Southeast, populations from the Southeast displayed a high potential for sexual reproduction. However, increasing watershed-level nitrogen (kg/km2) decreased percent seed germination in Southeastern populations, suggesting that Southeastern populations are sensitive to rising nitrogen levels. While elevated nitrogen improved seedling performance through increased belowground growth in SoutheasternPhragmitesseedlings, elevated nitrogen decreased belowground growth in Midwestern seedlings. These results suggest that the southeastern region of North America may be primed to become an emergent invasion front ofPhragmites, warranting more research into the possible management ofPhragmitesspread in the region. 
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  3. Abstract AimsThe goal of this study was to explore the suitability of recycled glass sand for the growth of beach-adapted plant species given the potential environmental benefits of utilizing glass sand for beach and dune restoration in the face of dwindling natural sand resources. MethodsWe grew three species native to US Gulf of Mexico beaches (Ipomoea imperati(Vahl) Griseb.,I. pes-caprae(L.) R.Br., andUniola paniculata(L.)) in three greenhouse experiments in glass sand, beach sand, or mixtures. First, we investigated nutrient and microbial effects by growing each species in pure glass sand, beach sand, and 80%/20% mixtures of glass sand/beach sand. Second, we comparedU. paniculatagrowth in glass sand mixed with 100%, 75%, 50%, 25%, or 0% beach sand. These experiments included fertilizer and microbial sterilization treatments. Third, we investigated soil permeability effects by comparing growth of all species using different grain sizes of glass sand. ResultsOverall, plants produced significantly more biomass in beach sand than in glass sand, and the effect was more pronounced with the fertilizer treatment. There were significant effects of substrate mixtures and interactions with fertilizer treatments onUniolabiomass. Further, when glass sand grain sizes were manipulated, plant biomass was equal or higher in the coarsest glass sand compared to beach sand. ConclusionsOur results demonstrate that beach-adapted plants can grow in glass sand and suggest that recycled glass sand is a potential resource for ecological restoration with incorporation of soil amendments such as fertilizer and utilization of selected grain sizes. 
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  4. Endosymbionts play important roles in the life cycles of many macro-organisms. The indolizidine alkaloid swainsonine is produced by heritable fungi that occurs in diverse plant families, such as locoweeds (Fabaceae) and morning glories (Convolvulaceae) plus two species of Malvaceae. Swainsonine is known for its toxic effects on livestock following the ingestion of locoweeds and the potential for pharmaceutical applications. We sampled and tested herbarium seed samples ( n = 983) from 244 morning glory species for the presence of swainsonine and built a phylogeny based on available internal transcribed spacer (ITS) sequences of the sampled species. We show that swainsonine occurs only in a single morning glory clade and host species are established on multiple continents. Our results further indicate that this symbiosis developed ∼5 mya and that swainsonine-positive species have larger seeds than their uninfected conspecifics. 
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  5. Abstract Coastal systems are immensely valuable to humans. They contain unique ecosystems that are biodiversity reservoirs and provide key ecosystem services as well as a wealth of cultural heritage. Despite their importance to humans, many coastal systems are experiencing degradation that threatens their integrity and provisioning of services. While much is known about the plant communities and associated wildlife in coastal areas, the importance of microorganisms represents a large knowledge gap. Here we review the ecology of plant-microbial symbioses in coastal systems, including mycorrhizae, nitrogen fixers, endophytes, rhizosphere microbes, and pathogens. We focus on four common coastal communities: sand dunes, marshes, mangroves, and forests/shrublands. We also assess recent research and the potential for using microbes in coastal restoration efforts to mitigate anthropogenic impacts. We find that microbial symbionts are largely responsible for the health of plants constituting the foundation of coastal communities by affecting plant establishment, growth, competitive ability, and stress tolerance, as well as modulating biogeochemical cycling in these stressful coastal systems. Current use of microbial symbionts to augment restoration of stressful and degraded coastal systems is still very much in its infancy; however, it holds great promise for increasing restoration success on the coast. Much research is still needed to test and develop microbial inocula for facilitating restoration of different coastal systems. This is an excellent opportunity for collaboration between restoration practitioners and microbial ecologists to work toward a common goal of enhancing resilience of our coastal ecosystems at a time when these systems are vulnerable to an increasing number of threats. 
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  6. A vector's susceptibility and ability to transmit a pathogen—termed vector competency—determines disease outcomes, yet the ecological factors influencing tick vector competency remain largely unknown. Ixodes pacificus, the tick vector of Borrelia burgdorferi (Bb) in the western U.S., feeds on rodents, birds, and lizards. Rodents and birds are reservoirs for Bb and infect juvenile ticks, while lizards are refractory to Bb and cannot infect feeding ticks. Additionally, the lizard bloodmeal contains borreliacidal properties, clearing previously infected feeding ticks of their Bb infection. Despite I. pacificus feeding on a range of hosts, it is undetermined how the host identity of the larval bloodmeal affects future nymphal vector competency. We experimentally evaluate the influence of larval host bloodmeal on Bb acquisition by nymphal I. pacificus. Larval I. pacificus were fed on either lizards or mice and after molting, nymphs were fed on Bb-infected mice. We found that lizard-fed larvae were significantly more likely to become infected with Bb during their next bloodmeal than mouse-fed larvae. We also conducted the first RNA-seq analysis on whole-bodied I. pacificus and found significant upregulation of tick antioxidants and antimicrobial peptides in the lizard-fed group. Our results indicate that the lizard bloodmeal significantly alters vector competency and gene regulation in ticks, highlighting the importance of host bloodmeal identity in vector-borne disease transmission and upends prior notions about the role of lizards in Lyme disease community ecology. 
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  7. The future trajectory of global forests is closely intertwined with tree demography, and a major fundamental goal in ecology is to understand the key mechanisms governing spatio‐temporal patterns in tree population dynamics. While previous research has made substantial progress in identifying the mechanisms individually, their relative importance among forests remains unclear mainly due to practical limitations. One approach to overcome these limitations is to group mechanisms according to their shared effects on the variability of tree vital rates and quantify patterns therein. We developed a conceptual and statistical framework (variance partitioning of Bayesian multilevel models) that attributes the variability in tree growth, mortality, and recruitment to variation in species, space, and time, and their interactions – categories we refer to asorganising principles(OPs). We applied the framework to data from 21 forest plots covering more than 2.9 million trees of approximately 6500 species. We found that differences among species, thespeciesOP, proved a major source of variability in tree vital rates, explaining 28–33% of demographic variance alone, and 14–17% in interaction withspace, totalling 40–43%. Our results support the hypothesis that the range of vital rates is similar across global forests. However, the average variability among species declined with species richness, indicating that diverse forests featured smaller interspecific differences in vital rates. Moreover, decomposing the variance in vital rates into the proposed OPs showed the importance of unexplained variability, which includes individual variation, in tree demography. A focus on how demographic variance is organized in forests can facilitate the construction of more targeted models with clearer expectations of which covariates might drive a vital rate. This study therefore highlights the most promising avenues for future research, both in terms of understanding the relative contributions of groups of mechanisms to forest demography and diversity, and for improving projections of forest ecosystems. 
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  8. Abstract Numerous studies have shown reduced performance in plants that are surrounded by neighbours of the same species1,2, a phenomenon known as conspecific negative density dependence (CNDD)3. A long-held ecological hypothesis posits that CNDD is more pronounced in tropical than in temperate forests4,5, which increases community stabilization, species coexistence and the diversity of local tree species6,7. Previous analyses supporting such a latitudinal gradient in CNDD8,9have suffered from methodological limitations related to the use of static data10–12. Here we present a comprehensive assessment of latitudinal CNDD patterns using dynamic mortality data to estimate species-site-specific CNDD across 23 sites. Averaged across species, we found that stabilizing CNDD was present at all except one site, but that average stabilizing CNDD was not stronger toward the tropics. However, in tropical tree communities, rare and intermediate abundant species experienced stronger stabilizing CNDD than did common species. This pattern was absent in temperate forests, which suggests that CNDD influences species abundances more strongly in tropical forests than it does in temperate ones13. We also found that interspecific variation in CNDD, which might attenuate its stabilizing effect on species diversity14,15, was high but not significantly different across latitudes. Although the consequences of these patterns for latitudinal diversity gradients are difficult to evaluate, we speculate that a more effective regulation of population abundances could translate into greater stabilization of tropical tree communities and thus contribute to the high local diversity of tropical forests. 
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  9. Novel in their scope and intensity, human‐mediated changes in genetic diversity through directed gene transfer technologies and longer standing human‐driven selective pressures, such as land‐use change, species introductions, mass extinctions, and broad application of antibiotics, are combining to reorganize mechanisms of evolution. The evolutionary consequences of anthropogenic change can be observed across levels of biological organization and are influencing the rate of micro‐ and macroevolutionary changes, as well as feedback among them. This may have large‐scale effects on the provisioning of ecosystem services, food security, and human health. Here, we summarize several of the ecological implications of human modification of evolutionary dynamics, focusing specifically on emerging molecular technologies, to highlight some of the challenges in predicting subsequent changes in the world’s ecosystems. 
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  10. Abstract One mechanism proposed to explain high species diversity in tropical systems is strong negative conspecific density dependence (CDD), which reduces recruitment of juveniles in proximity to conspecific adult plants. Although evidence shows that plant-specific soil pathogens can drive negative CDD, trees also form key mutualisms with mycorrhizal fungi, which may counteract these effects. Across 43 large-scale forest plots worldwide, we tested whether ectomycorrhizal tree species exhibit weaker negative CDD than arbuscular mycorrhizal tree species. We further tested for conmycorrhizal density dependence (CMDD) to test for benefit from shared mutualists. We found that the strength of CDD varies systematically with mycorrhizal type, with ectomycorrhizal tree species exhibiting higher sapling densities with increasing adult densities than arbuscular mycorrhizal tree species. Moreover, we found evidence of positive CMDD for tree species of both mycorrhizal types. Collectively, these findings indicate that mycorrhizal interactions likely play a foundational role in global forest diversity patterns and structure. 
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